BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C04LP1|AL426176
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1159 898 0.0
3x_Contig1752 107 3e-23
>3x_Contig1159
Length = 4873
Score = 898 bits (453), Expect = 0.0
Identities = 453/453 (100%)
Strand = Plus / Minus
Query: 1 acaagaaaaaaaatattaaaaaattaaaaattataaaaattaattacaagctggctcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 acaagaaaaaaaatattaaaaaattaaaaattataaaaattaattacaagctggctcttt 394
Query: 61 tgacctgggacagtgaagaatattttcaattctcttttcccatctgccatatttcttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tgacctgggacagtgaagaatattttcaattctcttttcccatctgccatatttcttttc 334
Query: 121 tttctattttgttttgtttgtcttttaaagtcctccccattttgcattgttcactatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tttctattttgttttgtttgtcttttaaagtcctccccattttgcattgttcactatcct 274
Query: 181 gtagtccattcctcttctgtttttttctttattgttgtttatcacattaatgtttgctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gtagtccattcctcttctgtttttttctttattgttgtttatcacattaatgtttgctag 214
Query: 241 acccgcctcatattatgtctaacgcctgagtttattggtactttgactctattgtcttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 acccgcctcatattatgtctaacgcctgagtttattggtactttgactctattgtcttca 154
Query: 301 ctctattgaaacgatattaagtgtaatttttctttcctactttcactttattgatcatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ctctattgaaacgatattaagtgtaatttttctttcctactttcactttattgatcatat 94
Query: 361 tgtatccacaaaataccattggtatcattttcatttattttatattccccaggctacttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tgtatccacaaaataccattggtatcattttcatttattttatattccccaggctacttc 34
Query: 421 tacatattccaagtcaaacacgtaacaagacct 453
|||||||||||||||||||||||||||||||||
Sbjct: 33 tacatattccaagtcaaacacgtaacaagacct 1
>3x_Contig1752
Length = 22471
Score = 107 bits (54), Expect = 3e-23
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 760 aatagcgccgctcggtttcgatccgaggacatcagggttatgagccctgcgcgc 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15784 aatagcgccgctcggtttcgatccgaggacatcagggttatgagccctgcgcgc 15837
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9751
Number of Sequences: 1807
Number of extensions: 9751
Number of successful extensions: 107
Number of sequences better than 1.0e-20: 2
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)